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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PNUTS-PB, PNUTS-PA
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRIVPLQLL RCLRVLLDNN GGILSAVEVK RISGLMAKYS KKLVSKCVYV QILKSTKTEL  60
   61 LGDFMAVGGW SLVYTWLNDA IRAMNWPLVQ EILELLLLSP VDVNRLKINS APILVKGLCK 120
  121 DGGNEGVRIL AKRLVEQWLK IVTENTSMTI QGAAPHIAAT TASQVPASVS GAGSASVPDS 180
  181 ASSSDSTDSA GAPVTYTITS AANSSNSNSI TIKWKPLLDN PDGGDETDSG TQSKDNEVEH 240
  241 LEKGSSATHL LADASLGKKS GLDDSSSAAE VKSGEDVDNK KHKSSKSDKS KRSEKEREKD 300
  301 RKKESSSHRS SSSSHKSSSS SSSSSSKSSS SKSSSSSSSS HRSSSDKYRD KDKARSSSGS 360
  361 SSSSKDRERS SGSSSSSSNK HKSSKSSSSS SSSSSSSSGS SSSKDRKSSS STSSSSSSSR 420
  421 QDKDKDNKLM PPPAVAASNA AGTSPTASAK ESDAQKPRSI PIMSRKASIS IEIRRDTEKT 480
  481 ATVKTYQSKF RSHGLTEEAP PPPSRKGLKK PTSSAVAASP ALMAVPSSLK RPSPPPRDLS 540
  541 TDKKAKIDIN NVAGHVERPG AAKLIAPKKS KQQMLESLLM LFSILFHSPR TLVAFAFVFD 600
  601 RSRMSNSAVL FVDLHSILKV FNFAWGGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle