YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0310352, FBp...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIIQPVQGT RYGPWPAVGL RLVLALAWAT SAAAAMESSA ELQALGYEAI RPGAASISTS  60
   61 SPSSSPPGES ASTVTAGGTP IPPRSDWKYK RTKVKRRQQR LNSHSNLPGS TNASHAHHLL 120
  121 NLPPRQRYLK VNQVFESERR MSPAEMQRNH GKIVLLGLFE LSTSRGPRPD GLSELGAATM 180
  181 AVEHINRKRL LPGYTLELVT NDTQCDPGVG VDRFFHAIYT QPSTRMVMLL GSACSEVTES 240
  241 LAKVVPYWNI VQVSFGSTSP ALSDRREFPY FYRTVAPDSS HNPARIAFIR KFGWGTVTTF 300
  301 SQNEEVHSLA VNNLVTELEA ANISCAATIT FAATDFKEQL LLLRETDTRI IIGSFSQELA 360
  361 PQILCEAYRL RMFGADYAWI LHESMGAPWW PDQRTACSNH ELQLAVENLI VVSTHNSIVG 420
  421 NNVSYSGLNN HMFNSQLRKQ SAQFHGQDGF GSGYGSRISI AATQSDSRRR RRRGVGGTSG 480
  481 GHLFPEAISQ YAPQTYDAVW AIALALRAAE EHWRRNEEQS KLDGFDYTRS DMAWEFLQQM 540
  541 GKLHFLGVSG PVSFSGPDRV GTTAFYQIQR GLLEPVALYY PATDALDFRC PRCRPVKWHS 600
  601 GQVPIAKRVF KLRVATIAPL AFYTIATLSS VGIALAIAFL AFNLHFRKLK AIKLSSPKLS 660
  661 NITAVGCIFV YATVILLGLD HSTLPSAEDS FATVCTARVY LLSAGFSLAF GSMFAKTYRV 720
  721 HRIFTRTGSV FKDKMLQDIQ LILLVGGLLL VDALLVTLWV VTDPMERHLH NLTLEISATD 780
  781 RSVVYQPQVE VCRSQHTQTW LSVLYAYKGL LLVVGVYMAW ETRHVKIPAL NDSQYIGVSV 840
  841 YSVVITSAIV VVLANLISER VTLAFITITA LILTSTTATL CLLFIPKLHD IWARNDIIDP 900
  901 VIHSMGLKME CNTRRFVVDD RRELQYRVEV QNRVYKKEIQ ALDAEIRKLE RLLESGLTTT 960
  961 STTTSSSTSL LTGGGHLKPE LTVTSGISQT PAASKNRTPS ISGILPNLLL SVLPPVIPRA1020
 1021 SWPSAEYMQI PMRRSVTFAS QPQLEEACLP AQDLINLRLA HQQATEAKTG LINRLRGIFS1080
 1081 RTTSSNKGST ASLADQKGLK AAFKSHMGLF TRLIPSSQTA SCNAIYNNPN QDSIPSEASS1140
 1141 HPNGNHLKPI HRGSLTKSGT HLDHLTKDPN FLPIPTISGG EQGDQTLGGK YVKLLETKVN1200
 1201 FQLPSNRRPS VVQQPPSLRE RVRGSPRFPH RILPPTCSLS ALAESEDRPG DSTSILGSCK1260
 1261 SIPRISLQQA TSGGTWKSME TAGKSRLSLG DSQEEEQQAP ANGTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle