YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194189663, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRPCAGNI LRIAGAVILP NLGGIYNGRL TRQHLQSWYA NLKFPSFKPP NSVFAPMWIS  60
   61 LYAGMGYGSY LVWRDGGGFA GEAAKLPLIA YGTQLALNWA WTPIFFGQHN IKGGLIDIVA 120
  121 LTAAASACGV LFYRVNKTAG LLFVPYVAWL GFATALNYAI WKLNPEKEQA PKDEEKPSSS 180
  181 HAKSS

Type	Start	End	Confidence
Cytoplasmic	1	9	0.75
Transmembrane Helix	10	30	0.73
Non-Cytoplasmic	31	53	0.66
Transmembrane Helix	54	73	0.91
Cytoplasmic	74	82	0.63
Transmembrane Helix	83	105	0.74
Non-Cytoplasmic	106	112	0.60
Transmembrane Helix	113	133	0.92
Cytoplasmic	134	140	0.56
Transmembrane Helix	141	161	0.90
Non-Cytoplasmic	162	185	0.66