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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG17636-PA
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCCKKYAVC WIILVVTALG VTLGLVFGLR SKAEEPRRIG AVASNGVGCA EVGGSILDIG  60
   61 GSAADAAIAT MLCEGVMLPH SLGVGGGFVA TIYSRETEFS EVLIARETAP AAATQDMFVK 120
  121 TEITGALSCA VPAEIYGYSE LHDKYGRLPW KTLFQPTIDL CRRGILVSRY LSGVLQREEE 180
  181 RIRNEPSMAE IFINPKTDEV YKQGEVMYRH TLAETLEIIA DEGAKAIYGG GRVGRKLVED 240
  241 IQAMGGIVTE EDLQSYNVRW EMPLHSHFSG GYKLITSTLP TSGAVLTFML NVMEPLYTSN 300
  301 TDKYWQRLIE TFKHAYGHRT NLGDIHYEPD VQEMYENLID PAFAAEIRKL ILDDRTFEDM 360
  361 SYYGANFANE EDHGTAHISV LAPNGDAISV TSTINSHLGA KVRSRQTGFI LNDEMDDFST 420
  421 PGKINAYGIP ASPANFIKPG KRPMSSTCPS IVLDTHGNVK LIVGGAGGSK ITTSVAQTIL 480
  481 RYFVLHEPIE KAVNSGRLHH QLAPMHIDME PNVPRHTVAY LSAIGHDIRF LEDDKAYSAQ 540
  541 TAIGILGTEP HPVCDRRRVG SAVVVEPDRV E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle