YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG40451-PA, FBpp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYAREPCP YRIVDDCGGA FAMGCIGGGV FQAIKGFRNA PSGLNRRLVG SIIAIKTRSP  60
   61 VIAGNFAVWG GMFSTIDCTL VHFRKKEDPW NSIISGAATG GILAARNGVP AMAGSAIIGG 120
  121 VLLALIEGVG ILFTRISADQ FKNPIPPAED PVALGDPGRN FSFESASNRT QYQ

Type	Start	End	Confidence
Cytoplasmic	1	16	0.65
Transmembrane Helix	17	34	0.71
Non-Cytoplasmic	35	60	0.52
Transmembrane Helix	61	81	0.71
Cytoplasmic	82	89	0.55
Transmembrane Helix	90	106	0.58
Non-Cytoplasmic	107	112	0.55
Transmembrane Helix	113	134	0.88
Cytoplasmic	135	173	0.85