YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149049270, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQTLIICST LNVNSQQKSK AKNSMKNTFH SNELSSIEQR QKYQKHLKKD KKTAEDITGV  60
   61 GNCSPPWRLI SSVLFVVCLL LMAVAMVMTI FTTRLSSERS SSNIHQEGLH HPCPENWVWF 120
  121 RCSCYYFSKE KLVWRESQRA CLSFNSSLIR MNKEEMDFFS LKSFFWVGVY YDETSKQWLW 180
  181 DDHSVLPSGM FSGLESSPKN FCASYKSKEA YLAENCSTKL MYICKK

Type	Start	End	Confidence
Cytoplasmic	1	71	0.88
Transmembrane Helix	72	92	0.95
Non-Cytoplasmic	93	226	0.90