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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29242979, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTVMTRQPC EQAGFRALSR TPAIVTLVVL LVSIVVLVTL TLIQIHHPQV LSPGLKYGIV  60
   61 LDAGSSRTTV YVYQWPAEKE NNTGVVSQTF RCSVKGSGIS SYENNPQDAP KAFEDCMLKV 120
  121 KEQVPKHLHE STRVYLGATA GMRLLRLQNE TAAHEVLESI QSYFKSQPFD FRGAQIISGQ 180
  181 EEGVYGWITA NYIMGNFLEK NLWHMWVHPH GVDTTGALDL GGASTQISFV SEEKMEPNAS 240
  241 DTVQVSLYGY TYTLYTHSFQ CYGRNEAEKK FLAMLLQSPS TDANISNPCY PHGYSTTFTM 300
  301 GHVFGSLCTE KQRPKSYNPS DTITFTGTGD PQLCREKVAS VFDFSACQEQ DACSFDGIYQ 360
  361 PKVQGPFVAF AGFYYTASAL NLSGSFSLTS FNDSSWDFCR HTWSELPSLL PRFDETYARS 420
  421 YCFSAHYIYH LLINGYKFTE ATWPQIRFEK EVGNSSIAWS LGYMLSLTNQ IPAGSPLIQL 480
  481 PIQPPVFMGV LAFFTAIALL CLAFLFYLCS AFRTKERSEN AFDQAVDSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle