YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38051925, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.58
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPGWPRPLP QLLVLGFGLV LIRATAGEQA PGNAPCSSGS SWSADLDKCM DCASCPARPH  60
   61 SDFCLGCAAA PPAHFRMLWP ILGGALSLAL VLALVSGFLV WRRCRRREKF TTPIEETGGE 120
  121 GCPGVALIQ

Type	Start	End	Confidence
Signal Peptide	1	26	0.58
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	78	0.97
Transmembrane Helix	79	101	0.93
Cytoplasmic	102	129	0.98