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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: T132A_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.83
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTERAAAAPR GPYGAWLCLL VALALEVVRV GSNQNTLDPI YLPVALELLD APEHFRVQQV  60
   61 GHYPPANSSL GSRSETFLLM QPWPRAQPLL RASYPPFATQ QVVPPRVTEP HRRPVPWDVR 120
  121 AVSVEAAVTP AEPYARVLFH LKGQDWPPGP GSLPCARLHA THPAGTAHQA CRFQPSLGAC 180
  181 VVELQFPSQW FSQSATTRAE LAYTLEPAGE GPGGCGPGTE EEPKEQALPV GSVELHPEDP 240
  241 PQHQEVPLDE VVTLRAPDVP VRPGQLFTAT LLLRHNFTAS LLTLRIKVKK GLQVTAARPA 300
  301 QPTFWTAKLD RFKGSKHHTS LITCHRTGPA GPDSRPLELP EFLWVDFAVE NSTGGGVAVT 360
  361 RPVTWQLEYP GQAPEAEKDK MVWEILFSER DIRALIPLAK AEELVNTAPL TGVPQRIPVR 420
  421 LVTVDSGGAL EEVTEHIGCE SANTQVLQVS EACDAVFVAG QESRGAKGVR VDFWWRRLRA 480
  481 SLKLTVWAPL LPLRIELTDT TLEQIRGWRV PGPAEGQLEP EAAAEEVERR SRGCRLQYQR 540
  541 AGVRFLVPFA AHPLDGGRRL THLLGPDWLL DVSHLVAAHA HVQDPRIATL EGGRILVGRE 600
  601 PGVTSIEVRS PLSDSILGEQ ALAVTDDKVS VLDLRVQPVM GISLSLSRGV SHPGEVTATC 660
  661 WAQSALPAPK QEVALSLWLS FSDHTLAPAE LYDRNDLGLS VSAEEPSAVV PAEEQRAQLG 720
  721 VVVSGVGAKG LPLHVALHPP EPCRRGRHRV PLASGTAWLG LPPLPTPAPA LPSSPARTPP 780
  781 FTEASVEGKR QVAGDMGSHV GPGIRGKFER AEEEAGKEEN EAKEEEEDEE EMVPAPQRVT 840
  841 DLELGMYALL GIFCLAFLIF LVNGVVFVLR YQRKEPPDSV TDPASPQPHN WVWLGTNQEE 900
  901 LSRQLDRCSS SSPPKGEGGC PCESGAGGDT STVAPSASES PAGSTSTLAR KEAGGRRKRV 960
  961 EFVTFAPAPP AQEAPEEPVG APAVQSILVA GEEDIRWVCE DMGLKDPEEL RNYMERIRGS1020
 1021 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle