YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|31077104, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQHALDVGG TVDAGHPPGT AQPPDAAFLR DTGLPSDAAF LVDTVRLTEA ALPTDAACPA  60
   61 VNVRDPEAAW PPALNFCSRH PRLYCLGGLV LLLLVACVPI FIRILPQPAL TITTSPDLDT 120
  121 GENTADQVTP VSHIGCANTT QQGFPVFAKL LAKNQASLSN TTLNWHSQEG AGSSYLSRGL 180
  181 RYEEDKKELV VDSPGLYYVF LELKLSPTSI NTGRKVQGWV SLVLQAKPQV DHLDSLALTV 240
  241 ELFPCSMEDK LVDRSWNRLL RLKAGHRLSV DLRAYLHGAQ DAYRDWELSH ANTTSFGLFL 300
  301 VKPDPPQG

Type	Start	End	Confidence
Cytoplasmic	1	82	0.97
Transmembrane Helix	83	105	0.90
Non-Cytoplasmic	106	308	0.98