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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31077132, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFQEPWLYS CLLWATVAIL LVPPVVTQEL RGTGLGLGNW NNNAGIPGSS EDLSTEYGHH  60
   61 IHSHGAYQGE KDRHHREEDE DFSREYGHQV QDHRYPGHEV GEENVSEEVF RGHVRQLHGH 120
  121 HKPNSEDLGD SAESHFPRQQ SHNREEEDGV VSGEDHRHIP RHDHHGNEEE DDDGEEEERV 180
  181 GVMENSDDKH QAHGHHSHSK ERDGLHHAHS HRHQGHHDED DDDEDGVSTE GEHQAHRYQD 240
  241 HDEEDDDDSD EESHAHRLQG QEDENDDEDG DSSENGHQTQ DHQGHKEQDD DDDEEEEEEE 300
  301 EEEEEEEEEE EEEEEEDDDD DSTEHRHRHQ TQGHRKGKDE DESDEDDHVT RHGRRGHEDE 360
  361 DDDDDDDDDD DDDNDGGSTE NVHQAHRHRG HEHEDDGDDS EEDYHHVPSH GHQSHQNEEE 420
  421 EDEAVSTEHW HQSPRHAHHD LGRENQEEAT VKYSRHVASH RPQGHSAEED SLEDSTNEVP 480
  481 GHHHHRVSRD GDEDISTEFG HKAPRHRLQD QDEWTRQGHG KSVQEDIGHQ PLQPTGPGSG 540
  541 ESRKEDDHSS QEGDEDLKQR QEAHSEEEEE EEEGHGLPMS LEDEEEEEKD KKESKGDRAA 600
  601 VSAPLSHHRK HDDDDDGDGD DDDDDNDDDD EILEENLLPF TIIPNPLAGR EVAREGSSEE 660
  661 ESREVTGQQD AQEYENYQPG SLCGYCSFCN RCSECESCHC DEENMGEHCD QCQHCQFCYL 720
  721 CPLVCDTLCT PGSYVDYFSS SVYQAVADML ETQEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle