YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27818333, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLFLGIAGL LTAVLSGLPP PAPSDQHRNG SIPNMSSDPE EQLGIRLVNG SSRCSGFVQV  60
   61 LLESWEPVCA GHWNRAATEA ACNALGCGDL GNFTHLAPPT SERPPGATSR NTSSSRNTTW 120
  121 AGAPTVRCHG ANWQLCKVED YECSSDRRLV WVTCAENQAV RLVDGGSRCA GRVEMLQHGE 180
  181 WGTVCDDTWD LDDANVVCKQ LKCGWAVKAL AGLHFTPGQG PIHRDQVNCS GTEAYLWDCP 240
  241 GRPGDQYCGH KEDAGVVCSE HQSWRLTGGV DSCEGQVEVY FRGVWSTVCD SEWYPSEAKV 300
  301 LCQSLGCGSE VDRPKGLPHS LAGRMYYSCK GEELTLSTCS WRFNNSNLCS QSLAARVVCS 360
  361 GSQRHPNLST SEVPSRVPVT IESSVPVSVK DKDSQNLTLL IPCIVLGILL LVSLIFIVFL 420
  421 LLKAKGQYAL PTSVNHQQLS TANPAGINNY HPVPITIAKE APMLFIKPRV PEDSDSSSES 480
  481 DYEHYDFSSQ PPVALTTFYN SQRHRVTEEE AQQNRFRMPP LEEGLEELHV SNIPAADPRP 540
  541 CVVDAPSLGS QYHTRNNSDS STSSEEGYCN DPSSKPPPWN SQVFSEKSPL TEQPPNLELA 600
  601 GSQAMFSAGA SADDSSSTSS GEWYQNFQPP PQDPPVEQFE CPGPPDLQAD SIDDDEEDYD 660
  661 DIGAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle