YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRYL1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPAAGGVV IIGSGLIGRS WAMLFASGGF KVKLYDIEQQ QITNALESIR KEMKSLEQSG  60
   61 SLKGSLGAEQ QLSLISGCGN LAEAVEGAMH IQECVPENLE LKKKIFAQLD RIVDDQVILS 120
  121 SSSSCLLPSK LFTGLAHVKQ CIVAHPVNPP YYVPLVELVP HPETAPATMD RTYALMKKIR 180
  181 QTPVRVLKEI DGFVLNRLQY AIISEAWRLV EEGIVSPNDL DLVMSDGLGM RYAFIGPLET 240
  241 MHLNAEGMVS YCDRYSEGMK RVLKTFGPVP EFSGDTVEKV NQDMCMKVPD DPEHLAARRH 300
  301 WRDDCLMQLS KLKHQMQPQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.75
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	319	0.95