YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CO6_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRHLTLCFI LLIILIDKSE ACFCDHYPWT HWSSCSKSCN SGTQSRQRQI VVNDYYRDNS  60
   61 CDQLCTKQET RQCNVETCPI NCVLGDYGTW SDCDPCIRKQ VKVRSVLRPS QFGGQPCTEP 120
  121 LVTFQPCVPS ELCKIEETDC KNKFLCDSGR CIPSKLKCNG ENDCGDNSDE RNCGRTKPVC 180
  181 SRTYTPIPSV QLMGAGFHFL AGEPRGDVPD NSFTGGICKS VRSSRTSNPH RVPANLENVN 240
  241 FEVQTIEDDL KTDFYKDLAT IGKNKNEDRS LSGEKKDSFY VPIFYSSKKS ENFQRNSGFK 300
  301 NAIEASHKKD SSFVRIHKVI KVLNFTMKTT DLQLSDVFLK ALIHLPLEYN FALYSRIFDD 360
  361 FGTHYFTSGS LGGKYDLLYQ FSRQELQNSG LTEEETRNCV RYETKKRFLF FTKTYKEDRC 420
  421 TTNRLSEKYK GSFLQGSEKS ISLVQGGRSQ QAAALAWEKG SSGPEANVFS EWLESVKENP 480
  481 AVVDYELAPI IDLVRNIPCA VTKRNNLRKA LQEYAAKFDP CQCAPCPNNG RPRLSGTECL 540
  541 CVCQSGTYGE NCEKRSPDYK SNAVDGNWGC WSSWSACNAA YRRSRSRECN NPEPQRGGQR 600
  601 CEGKHWQEED CTFSIMEKVG QPCISDDEEI KEVDLAEPEA DSGCPQPPLP ENAFVWNEKK 660
  661 LYSVGEEVEI SCLTGFKAVG YQYFRCLPDR TWRQGDVECQ RTECLKPVVQ DVLTISPFQS 720
  721 VYKIGESIEL TCPRGFVVAG PSRYTCKGDS WTPPIPNSLS CEKDILTKSK GLCQPGQKQS 780
  781 GSECVCMSPE EDCSSYSEDL CIFDEGSSQY FTSSACKFLA EKCLNSNQFH FVHAGSCQEG 840
  841 PQLEWGLERL KLAMKSTKRV PCGYDTCYDW EKCSAHTSNC VCLLPPQCPK DENQLHCVKM 900
  901 GSSMRGKTVN ICTLGAVRCA NRKVEILNPG RCLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle