YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BST2_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSFYHYLP VAMDERWEPK GWSIRRWWLV AAILVVLIGV VLVCLIVYFA NAAHSEACKN  60
   61 GLRLQDECRN TTHLLKHQLT RAQDSLLQTE MQANSCNQTV MDLRDSLKKK VSQTQEQQAR 120
  121 IKELENKIER LNQELENLRT QKEISTTVQV NSGGSVVVSS LLVLVAVLFL HF

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.59
Transmembrane Helix	27	50	0.92
Cytoplasmic	51	147	0.59
Transmembrane Helix	148	170	0.82
Non-Cytoplasmic	171	172	0.56