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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109473416, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRWPLGLA LLLLLLCAPL PPGARAEEVT LMDTSTAQGE LGWLLDPPET GWSEVQQMLN  60
   61 GTPLYMYQDC PIQEGGDTDH WLRSNWIYRG EEASRVHVEL QFTVRDCKSF PGGAGPLGCK 120
  121 ETFNLFYMES DQDVGIQLRR PLFQKVTTVA ADQSFTIRDL ASGSVKLNVE HCSLGHLTRR 180
  181 GLYLAFHNPG SCVALVSVRV FYQRCAETVH GLAHFPHTLP GPTGLVEVAG TCLSHAQISL 240
  241 GSSGTPRMHC SPDGEWLVPV GQCQCEPGYE ESGGSVGCTA CPTGFYRMDM NTLHCLKCPQ 300
  301 HSVAESEGST ICTCENGHYR APGEGPQVAC TRPPSAPQNL SFSASGTQLS LRWEPPRDTG 360
  361 GRQDIRYSVE CLQCRGIAQD GGPCQPCGKG VHFSPAASGL TASTVQVEGL EPYANYTFTI 420
  421 KSQNRVSGLD SSSPSSASLS INMGQAESLS GLSLKLVKKE PRQLELTWAG SRLQNPGGNL 480
  481 SYELHVLNQD EEWHQMVLEP RVLLTKLQPD TTYIVRVRTL TPLGPGPFSP DHEFRTSPPV 540
  541 SRSLTGGEIV AIIFGLLLGI ALLIGIYVFR SRRGQRQRQQ RQRERTTNVD REDKLWLKPY 600
  601 VDLQAYEDPA QGALDFAQEL DPAWLIVDTV IGEGEFGEVY RGALRIPSQD CKTVAIKTLK 660
  661 DTSPDGYWWN FLREATIMGQ FNHPHILRLE GVITKRKPIM IITEFMENGA LDAFLKERED 720
  721 QLVPGQLVAM LLGIASGMNY LSGHNYVHRD LAARNILVNQ NLCCKVSDFG LTRLLDDFDG 780
  781 TYETQGGKIP IRWTAPEAIA HRIFTTASDV WSFGIVMWEV LSFGDKPYGE MSNQEVMKSI 840
  841 EDGYRLPPPV DCPAPLYELM KNCWAYDRAR RPHFLQLQAH LEQLLTDPHS LRTIANFDPR 900
  901 VTLRLPSLSG SDGIPYRSVS EWLESIRMKR YILHFRSAGL DTMECVLELT AEDLTQMGIT 960
  961 LPGHQKRILC SIQGFKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle