YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DRD5_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPPGRNRTA QPARLGLQRQ LAQVDAPAGS ATPLGPAQVV TAGLLTLLIV WTLLGNVLVC  60
   61 AAIVRSRHLR AKMTNIFIVS LAVSDLFVAL LVMPWKAVAE VAGYWPFGTF CDIWVAFDIM 120
  121 CSTASILNLC IISVDRYWAI SRPFRYERKM TQRVALVMVG LAWTLSILIS FIPVQLNWHR 180
  181 DKAGSQGQEG LLSNGTPWEE GWELEGRTEN CDSSLNRTYA ISSSLISFYI PVAIMIVTYT 240
  241 RIYRIAQVQI RRISSLERAA EHAQSCRSRG AYEPDPSLRA SIKKETKVFK TLSMIMGVFV 300
  301 CCWLPFFILN CMVPFCSSGD AEGPKTGFPC VSETTFDIFV WFGWANSSLN PIIYAFNADF 360
  361 RKVFAQLLGC SHFCFRTPVQ TVNISNELIS YNQDTVFHKE IATAYVHMIP NAVSSGDREV 420
  421 GEEEEEGPFD HMSQISPTTP DGDLAAESVW ELDCEEEVSL GKISPLTPNC FDKTA

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.79
Transmembrane Helix	40	64	0.85
Cytoplasmic	65	73	0.89
Transmembrane Helix	74	95	0.91
Non-Cytoplasmic	96	112	0.88
Transmembrane Helix	113	134	0.92
Cytoplasmic	135	153	0.88
Transmembrane Helix	154	174	0.94
Non-Cytoplasmic	175	224	0.93
Transmembrane Helix	225	243	0.95
Cytoplasmic	244	287	0.98
Transmembrane Helix	288	309	0.90
Non-Cytoplasmic	310	337	0.90
Transmembrane Helix	338	358	0.54
Cytoplasmic	359	475	0.61