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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACHB_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALGALLLIL GILGTPLAPG ARGSEAEGQL LKKLFSDYDS SVRPAQEVGD RVGVSIGLTL  60
   61 AQLISLNEKD EEMSTKVYLD LEWTDYRLSW DPAEHDGIES LRVTAESVWL PDVVLLNNND 120
  121 GNFDVALDIN VVVSFEGSVR WQPPGLYRSS CSIQVTYFPF DWQNCTMVFS SYSYDSSEVS 180
  181 LKTGPDPDGQ ERQEIYIHEG TFIENGQWEI IHKPSRLIHL PGDRRGGKEG HREEVIFYLI 240
  241 IRRKPLFYLV NVIAPCILIT LLAIFVFYLP PDAGEKMGLS IFALLTLTVF LLLLADKVPE 300
  301 TSLAVPIIIK YLMFTMILVT FSVILSVVVL NLHHRSPHTH QMPFWVRQIF IHKLPPYLGL 360
  361 KRPKPERDQL PEPHHSFSPR SGWGRGTDEY FIRKPPCDFL FPKLNRFQPE SPAPDLRRFI 420
  421 DGPPRAVGLP QELREVISSI SYMARQLQEQ EDHDALKEDW QFVAMVVDRL FLWTFIVFTS 480
  481 VGTLVIFLDA TYHLPPPEPF P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle