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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHST3_RAT
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGLALPQD CRDLVHNLKI RGRYVLFLAF VVIVFIFIEK ENKIISRVSD KLKQIPQFVA  60
   61 DANSTDPALL LSENASLLSL SELDSTFSHL RSRLHNLSLQ LGIAPAMEAQ GQEAVAEKPS 120
  121 QQAGAGTRRH VLLMATTRTG SSFVGEFFNQ QGNIFYLFEP LWHIERTVFF QQGGASAAGS 180
  181 ALVYRDVLKQ LLLCDLYVLE PFISPPPEDH LTQFLFRRGS SRSLCEDPVC TPFVKKVFEK 240
  241 YHCRNRHCGP LNVTLAAEAC RRKDHMALKV VRIRQLEFLQ PLAEDPRLDL RVIQLVRDPR 300
  301 AVLASRMVAF AGKYESWKKW LSEGQDQLSE NEVQRLRGNC ENIRLSAELG LRQPAWLRGR 360
  361 YMLVRYEDVA RRPLQKAREM YRSAGIPLTP QVEDWIQKNT QAARDSSDVY STQKNSSEQF 420
  421 EKWRFSIPFK LAQVVQAVCG PAMHLFGHKL AKDTASLTNR SISLLEERGT FWVT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle