YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CD151_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEFNEKKAT CGTVCLKYLL FTYNCCFWLA GLAVMAVGIW TLALKSDYIS LLASSTYLAT  60
   61 AYILVVAGVV VMVTGVLGCC ATFKERRNLL RLYFILLLII FLLEIIAGIL AYVYYQQLNT 120
  121 ELKENLKDTM IKRYHQSGHE GVTNAVDKLQ QEFHCCGSNN SRDWRDSEWI RSGEADSRVV 180
  181 PDSCCKTVVT GCGKREHASN IYKVEGGCIT KLESFIQEHL RVIGAVGIGI ACVQVFGMIF 240
  241 TCCLYRSLKL EHY

Type	Start	End	Confidence
Cytoplasmic	1	19	0.96
Transmembrane Helix	20	43	0.90
Non-Cytoplasmic	44	58	0.90
Transmembrane Helix	59	81	0.93
Cytoplasmic	82	91	0.82
Transmembrane Helix	92	114	0.93
Non-Cytoplasmic	115	221	0.99
Transmembrane Helix	222	245	0.88
Cytoplasmic	246	253	0.89