YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PMP22_RAT
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLLLGILF LHIAVLVLLF VSTIVSQWLV GNGHRTDLWQ NCTTSALGAV QHCYSSSVSE  60
   61 WLQSVQATMI LSVIFSVLSL FLFFCQLFTL TKGGRFYITG VFQILAGLCV MSAAAIYTVR 120
  121 HSEWHVNNDY SYGFAYILAW VAFPLALLSG IIYVILRKRE

Type	Start	End	Confidence
Cytoplasmic	1	7	0.86
Transmembrane Helix	8	30	0.91
Non-Cytoplasmic	31	66	0.93
Transmembrane Helix	67	88	0.92
Cytoplasmic	89	95	0.85
Transmembrane Helix	96	118	0.91
Non-Cytoplasmic	119	133	0.91
Transmembrane Helix	134	156	0.93
Cytoplasmic	157	160	0.95