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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DPOG1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLLWKKVA GAKVASGPVP ATGRWVSSSV LDPVPSDGQP QSQMPSSENG QLRLNPLHIQ  60
   61 MLSRGLHEQI FGCGGDVPDE AAVQRSIEHL RKHGLWGQPT TPLPDVQLRL PRLFGGNLDQ 120
  121 HFRLLAQKQS LPYLEAAASL SEAQLPPQPR KWVWAEGWTR YGPEGEAEPV AIPEERALVF 180
  181 DVEVCLAEGT CPTLAVAISP SAWYSWCSRR LVEERYSWTS QLSPADLIPL GVSASASSST 240
  241 QQDWQEQLVV GHNVSFDRAH IREQYLIQGS RMRFLDTMSM HMAISGLSSF QRSLWMGAKQ 300
  301 GKHKTQHPTK RGQKSQKNAN GPAISSWDWM DISSANNLAD VHNLYVGGPR LAKEPRELFV 360
  361 KGSMRDIREN FQDLMEYCAR DVWATFEVFQ QQLPLFLERC PHPVTLAGML EMGVSYLPVN 420
  421 QNWERYLTEA QSTYEELQRE MKKSLMELAN DACQLLSGER YKEDPWLWDL EWDLQEFKQK 480
  481 KAKKVKKTAS ASKLPIEGAG PFGDPMDQED PGPPSEEEEL QQNIMAHTRL QQLKSTTDLL 540
  541 PKRPQHLPGH PGWYRKLCPR LDDPAWTPGP SLLSLQMRVT PKLMALTWDG FPLHYSDSHG 600
  601 WGYLVPGRRD NLTELPVSPT EESAAVTCPY RAIESLYRRH CLDQGKQQLE TQETDLAEEF 660
  661 LLTDSAMWQT VEELGCLDVE AEATVESSGL SQPLVPPTAC APKTSQPTYH HGNGPYNDVD 720
  721 IPGCWFFKLP HKDGNNYNVG SPFAKDFLPK MEDGTLQAGP GGARGPRALE INKMISFWRN 780
  781 AHKRISSQMV VWLPRSALPR AVTRHPSFDE ESHYGAILPQ VVTAGTITRR AVEPTWLTAS 840
  841 NARPDRVGSE LKAMVQAPPG YVLVGADVDS QELWIAAVLG DAHFAGMHGC TAFGWMTLQG 900
  901 RKSRGTDLHS KTAATVGISR EHAKVFNYGR IYGAGQSFAE RLLMQFNHRL SRQEAADKAQ 960
  961 QMYAVTKGLR RYRLSDDGEW LVKQLNVPVD RTEDGWVSLQ DLRKIRREAS RKSRWKKWEV1020
 1021 VTERAWTGGT ESEMFNKLES IAMSDTPRTP VLGCCISRAL EPSVVQGEFM TSRVNWVVQS1080
 1081 SAVDYLHLML VAMKWLFEEF AIDGRFCISI HDEVRYLVRE EDRYRAALAL QITNLLTRCM1140
 1141 FAYKLGLNDL PQSVAFFSAV DIDQCLRKEV TMDCKTPSNP TGMERKYGIP QGEALDIYQI1200
 1201 IELTKGSLEK RSQPGP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle