YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPX3_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRILRASCL LSLLLAGFVP PGRGQEKSKT DCHGGMSGTI YEYGALTIDG EEYIPFKQYA  60
   61 GKYILFVNVA SYCGLTDQYL ELNALQEELG PFGLVILGFP CNQFGKQEPG ENSEILPSLK 120
  121 YVRPGGGFVP NFQLFEKGDV NGEKEQKFYT FLKNSCPPTA ELLGSPGRLF WEPMKIHDIR 180
  181 WNFEKFLVGP DGIPIMRWYH RTTVSNVKMD ILSYMRRQAA LGARGK

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	226	0.99