YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	B3GL1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPAVLTAIP NRMSLRSLKW SLLLLSLLSF LVIWYLSLPH YNVIERVNWM YFYEYEPIYR  60
   61 QDFQFTLREH SNCSQQNPFL VILVTSRPSD VKARQAIRVT WGEKKTWWGH EVLTFFLLGQ 120
  121 EAEREDKVLA LSLEDEHALY GDIIRQDFLD TYNNLTLKTI MAFRWVIEFC PNAKYVMKTD 180
  181 TDVFINTGNL VKYLLNLNHS EKFFTGYPLI ENYSYRGFFH KNHISYQEYP FKVFPPYCSG 240
  241 LGYIMSGDLV PKIYEMMGHV KPIKFEDVYV GICLNLLKVD IHIPEDTNLF FLFRIHLDVC 300
  301 QLRRVIAAHG FSSKEIITFW QVMLRNTTCH Y

Type	Start	End	Confidence
Signal Peptide	1	39	0.65
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	331	0.99