YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220734, gi\|111591
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLEPAPLLG AGLSRRVLLQ AGSRLAAGGP GRARRFSNKA VLVEKEGEAG IAVMKFKNPP  60
   61 VNSSAWSFRQ SFRHQPEKLE NEKSIRGVIL TSERPGTSPP PHDMKKKDDQ PTMLSTGRLV 120
  121 PGAVAEALLV QPDLISAING AFPAGGCLMA LTCDYRIMAD NSKYTIGLNE SLLGIVAPFW 180
  181 LKDNYVNTSG TEQPSVPFNW GRFPTNMTAA ALLTLHRSLN EVVPEDQVHS KARSVMAKWF 240
  241 TIPDHSRLLT KSMMRKATAD NLIKQREADI QNFTSFTSRD SIQKSLHVYL EKLKQKKG

Type	Start	End	Confidence
Signal Peptide	1	19	0.55
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	298	0.97