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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PADI1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQRAVQLS LRKPAHAVCV IGVGTLVDVY SDVPKGAKTF EVSGSSEVKI YMVYDPSRVA  60
   61 EPAGPAHWPL DANVDVVVVA DTVSKNLHDL KVKVSYFKSQ DTAALAHSLL YLTAVDVSLD 120
  121 VDTGRTGKVK KGSGDKKNWR WGSGGSGAIL LVNCDRDVHG SREDLHDSHL RSLEDLQDMS 180
  181 PMVLSCDGPD DLFKSHKPVL KASLPDSRRL GVFCARGGTS LSNYKQVLGP RHNSYEVERH 240
  241 PGERDIQFYV EGLAFPDASF SGLLSLSVSL VDTRPLSEVL VFTDSVTFRV APWIMTPNTQ 300
  301 PPLELYVCSV TDMHGSNDKF LEDMSHLATK ANCKLVVCPR LENRNDRWIQ DEMEFGYIDA 360
  361 PHKSFPVVFD SPRNRGLRDF ALKKILGPDF GYVTREIQFA GASGLDSFGN LDVSPPVRVG 420
  421 NTEYPLGRIL IGGNFPKSSG RRMARVVRDF LHAQQVQAPV ELYSDWLSVG HVDEFLSFVP 480
  481 TSDQKGFRLL LASPSACLQL FQEKKEEGYG EAKQFDGLKH KTKRSINDIL ADRHLRRDSA 540
  541 HVQKCIDWNR EVLKQELGLS ESDIVDIPQL FFLKGAYAEA FFPDMVNMVV LGKYLGIPKP 600
  601 FGPIINGRCC LEEKVRSLLE PLGLRCVFID DFLFYHQLLG EIHCGTNVRR KPFAFRWWNS 660
  661 VP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle