YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MBL2_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFTSFLLL CVLTAVYAET LTEGAQSSCP VIACSSPGLN GFPGKDGHDG AKGEKGEPGQ  60
   61 GLRGLQGPPG KVGPAGPPGN PGSKGATGPK GDRGESVEFD TTNIDLEIAA LRSELRAMRK 120
  121 WVLLSMSENV GKKYFMSSVR RMPLNRAKAL CSELQGTVAT PRNAEENRAI QNVAKDVAFL 180
  181 GITDQRTENV FEDLTGNRVR YTNWNEGEPN NVGSGENCVV LLTNGKWNDV PCSDSFLVVC 240
  241 EFSD

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	244	0.99