YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2RY4_RAT
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.52
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Signal Peptide	1	19	0.52
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	37	0.87
Transmembrane Helix	38	58	0.95
Cytoplasmic	59	68	0.89
Transmembrane Helix	69	92	0.88
Non-Cytoplasmic	93	109	0.93
Transmembrane Helix	110	132	0.90
Cytoplasmic	133	146	0.94
Transmembrane Helix	147	169	0.91
Non-Cytoplasmic	170	195	0.93
Transmembrane Helix	196	219	0.90
Cytoplasmic	220	238	0.94
Transmembrane Helix	239	260	0.93
Non-Cytoplasmic	261	361	0.97

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSAESLLFT SLGPSPSSGD GDCRFNEEFK FILLPMSYAV VFVLGLALNA PTLWLFLFRL  60
   61 RPWDATATYM FHLALSDTLY VLSLPTLVYY YAARNHWPFG TGLCKFVRFL FYWNLYCSVL 120
  121 FLTCISVHRY LGICHPLRAI RWGRPRFASL LCLGVWLVVA GCLVPNLFFV TTNANGTTIL 180
  181 CHDTTLPEEF DHYVYFSSAV MVLLFGLPFL ITLVCYGLMA RRLYRPLPGA GQSSSRLRSL 240
  241 RTIAVVLTVF AVCFVPFHIT RTIYYQARLL QADCHVLNIV NVVYKVTRPL ASANSCLDPV 300
  301 LYLFTGDKYR NQLQQLCRGS KPKPRTAASS LALVTLHEES ISRWADTHQD STFSAYEGDR 360
  361 L