YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109491582, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPVSLREL LMGASAWLGS ESPGGPSAEG GGNAAAAPEP PWREDEICVV GIFGKTALRL  60
   61 NSEKFSLVNT VCDRQVFPLF HHQDPGDPGP GIKTKPVSVG EAGGAGDPGA AAGDSLRGGM 120
  121 ATAEGNRAEP GPQDFSLLQA YYNQESKVLY LILTSICDNS QLLRACRALQ SGEAGGGLSL 180
  181 PHAETHEFWK HQEKLQCLSL LYLFSVCHIL LLVHPTCSFD ITYDRVFRAL DGLRQKVLPL 240
  241 LKTAIKDCPV GKDWKLNCRP CPPRLLFLFQ LNGALKVEPP RSQDTAHPDK PKKHSPKRRL 300
  301 QHALEDQIYR IFRKSRVLTN QSINCLFTVP ANQAFVYIVP GSQEEDPIGM LLDQLRSHCT 360
  361 VKDPESLLVP APLSGPRRYQ AMRQHSRQQL SFHIDSSTSS SSGQLVDFTL REFLWQHVEL 420
  421 VLSKKGFDDS VGRNPQPSHF ELPTYQKWIS AAAKLYEVAI DGKEEDLGSP TGELTSKILS 480
  481 SIKVLEGFLD IDTKFSENRC QKALPMAHSA YQSNLPHNYT MTVHKNQLAQ ALRVYSQHAR 540
  541 GPAFHKYAMQ LHEDCYKFWS NGHQLCEERS LTDQHCVHKF HSLPKSGEKP EADRNPPVLY 600
  601 HNSRARSTGA CNCGRKQAPR DDPFDIKAAN YDFYQLLEEK CCGKLDHINF PVFEPSTPDP 660
  661 APAKNEPCPT PADSDAEKLK EKEPQTQGEG TSLSLALSLG QSTDSLGTYP ADPQAGGDNP 720
  721 DVHGQGEVKS EKRPNLVDRQ ASTVEYLPGM LHSNCPKGLL PKFSSWSLVK LGPAKSYNFH 780
  781 TGLDQQGFVP GTNYLMPWDI VIRTRAEDEG DLDTNSWPAP NKAIPGKRSA VVMGRGRRRD 840
  841 DIARAFVGFE YEDSRGRRFM CSGPDKVMKV MGSGPKESAL KALNSDMPLY ILSSSQGRGL 900
  901 KPHYAQLMRL FVVVPDAPLQ IILMPQVQPG PPPCPVFYPE KQELTLPPDG LWVLRFPYAY 960
  961 VTERGPCFPP KENVQLMSYK VLRGVLRAVT Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle