YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MUC24_RAT
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.98
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGASRGLFW AATCLAALCL SAAQSNSSAS PNVTDPPTTT SKVVPTTLTT TKPPETCESF  60
   61 NSCVSCVNAT LTNNITCVWL DCHEANKTYC SSELVSNCTQ KTSTDSCSVI PTTPVPTNST 120
  121 AKPTTRPSSP TPTPSVVTSA GATNTTVTPT SQPERKSTFD AASFIGGIVL VLGVQAVIFF 180
  181 LYKFCKSKER NYHTL

Type	Start	End	Confidence
Signal Peptide	1	29	0.93
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	160	0.99
Transmembrane Helix	161	182	0.94
Cytoplasmic	183	195	0.91