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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3342264, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPGPAAPSS GAPRPARDGD APLTAAGVDL PGTAVLSGRE DATAGSQAGG GVRGEGTPAA  60
   61 GDGLGKPLGP TPSQSRFQVD PVSENAGRAA AAAAAAAAAA AAGAAGKETP AAGKAGTESG 120
  121 VAKGSEEAKG RFRVNFVDPA ASSSADDSLS DAAGVGGDGP NVSSQNGGDT VLSEGSSLHS 180
  181 GGGSGHHQQY YYDTHTNTYY LRTFGHNTMD AVPRIDHYRH TAAQLGEKLL RPSLGEFHDE 240
  241 LEKEPFEDGF ANGEESTPTR DAVVTYTAES KGVVKFGWIK GVLVRCMLNI WGVMLFIRLS 300
  301 WIVGQAGIGL SVLVIAMATV VTTITGLSTS AIATNGFVRG GGAYYLISRS LGPEFGGAIG 360
  361 LIFAFPNAVA VAMYVVGFAE TVVELLKEHS ILMIDEINDI RIIGAITVVV LLGISVAGME 420
  421 WEAKAQIVLL VILLLAIADF VIGTFISLDS KKPKGFFGYK SEIFSENFGP DFREEETFFS 480
  481 VFAIFFPAAT GILAGANISG DLADPQSAIP KGTLLAILIT TVVYIGIAVS VGSCVVRDAT 540
  541 GNVNDTITTE LTNCTSAACK LNFDFSYCES NTCSYGLMNN FQVMSMVSGF APLISAGIFS 600
  601 ATLSSALASL VSAPKIFQAL CKDNIYPAFQ MFAKGYGKNN EPLRGYILTF LIALGFILIA 660
  661 ELNVIAPIIS NFFLASYALI NFSVFHASLA KSPGWRPAFK YYNMWISLTG AILCCIVMFV 720
  721 INWWAALLTY VIVLGLYIYV TYKKPDVNWG SSTQALTYLS ALQHSIRLSG VEDHVKNFRP 780
  781 QCLVMTGSPN SRPALLHLVH DFTKNVGLMI CGHVHMGPRR QAMKEMSIDQ AKYQRWLIKN 840
  841 KMKAFYAPVH ADDLREGAQY LMQAAGLGRM KPNTLVLGFK KDWLQADMRD VDMYINLFHD 900
  901 AFDIQYGVVV IRLKEGLDIS HLQGQEELLS SQEKSPGTKD VVVNVDYSKK SDQDAFKASG 960
  961 EKPITQKDEE EDGKTSTQPL LKKESKGPVA PLNVADQKLL EASTQFQKKQ GKNTIDVWWL1020
 1021 FDDGGLTLLI PYLLTTKKKW KDCKIRVFIG GKINRIDHDR RAMATLLSKF RIDFSDIMVL1080
 1081 GDINTKPKKE NIVAFDDMIE PYRLHEDDKE QDIADKMKED EPWRITDNEL ELYKTKTYRQ1140
 1141 IRLNELLKEH SSTANIIVMS LPVARKGAVS SALYMAWLEA LSKDLPPILL VRGNHQSVLT1200
 1201 FYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle