YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IYD1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLLTPVLVA VVCILVIWVF KNADRSLEEK KEEARAQPWV DEDLKDNTEH LQVEEDTEEW  60
   61 QESEESVEHI LFSHTRYPEQ EMRMRSQEFY ELLSKRRSIR FISSEPVPME VIDNVIKAAG 120
  121 TAPSGAHTEP WTFVVVKDPD MKHKIREIIE EEEEINYMKR MGKRWVTDLK KLRTNWIKEY 180
  181 LDTAPVLILI FKQVHGFAVN GKKKVHYYNE ISVSIACGIL LAALQNAGLV TVTTTPLNCG 240
  241 PRLRVLLGRP SHEKLLVLLP VGYPSRGATV PDLKRKTLDQ IMVTV

Type	Start	End	Confidence
Signal Peptide	1	23	0.94
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	285	0.97