YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	C1QBP_RAT, MA32_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPLLRCVPR ALGAAATGLR ASIPAPPLRH LLQPAPRPCL RPFGLLSVRA GSARRSGLLQ  60
   61 PPGSCACAAA LHTEGDKAFV EFLTDEIKEE KKIQKHKSLP KMSGDGELEV NGTEAKLLRK 120
  121 VAGEKITVTF NINNSIPPTF DGEEEPSQGQ KAEEQEPELT STPNFVVEVT KTDGKKTLVL 180
  181 DCHYPEDEIG HQDEAESDIF SIKEVSFQTT GDSEWRDTNY TLNTDSLDWA LYDHLMDFLA 240
  241 DRGVDNTFAD ELVELSTALE HQEYITFLED LKSFVKSQ

Type	Start	End	Confidence
Signal Peptide	1	21	0.83
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	278	0.99