YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PIGL_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVVGLLCVA VAVLTWGFLR VWNSAERMRS PEQAGLPGAG SRALVVIAHP DDEAMFFAPT  60
   61 ILGLARLKQQ VSLLCFSSGN YYNQGEIRKK ELLQSCAVLG IPPSRVMIID KREFPDDPEV 120
  121 QWDTEHVAST ILQHIHANAT DLVVTFDAEG VSGHSNHIAL YKAVRALHSG GKLPEGCSVL 180
  181 TLQSVNVLRK YVFLLDLPWT LLSPQGVLFV LTSKEVAQAK KAMSCHRSQL LWFRHLYTVF 240
  241 SRYMSVNSLQ LL

Type	Start	End	Confidence
Signal Peptide	1	17	0.89
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	252	0.95