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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149026062, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILLAVLFLC FFSSYSASVK GHTTGLSLNN ERLYKLTYST EVFLDGGKGK LQDSVGYRIS  60
   61 SDVDVVLLWR NPDGDDDQLI QVTITAVNVE NAGQQRGEKS IFKGKSTPKI VGKDNLEALR 120
  121 RPMLLHLVRG KVKEFYSYEN EPVGIENLKR GLASLFQMQL TSGTTNEVDI SGDCKVTYQA 180
  181 QQDKVVKIKA LDTCKIERSG FTTANQVLGV TSKATSVTTY KIEDSFVTAV VAEETRAFAL 240
  241 NFLQTVAGKI VSKQKLELKT TEAGPRMVPG KQVAGVIKAI DSKYKAIPIV GQVLQSVCKG 300
  301 CPSLAEHWQS IRKHLEPENL SNAEAVQSFL AFIQHLRTSR REEILQILKA EKKEVLPQLV 360
  361 DAVTSAQTPA SLEAILDFLD FKSDSSIILQ ERFLYACGFA SHPDEELLQA LLSKFKGSFA 420
  421 SNDIRESVMI IIGALVRKLC QNEGCKLKAV VEAKKLILGG LEKPEKKEDT TMYLLALKNA 480
  481 LLPEGIPLLL KYAEAGEGPV SHLATTVLQR YDASFITDEV KKTLNRIYHQ NRKVHEKTVR 540
  541 TTAAAVILKN NPSYMDVKNI LLSIGELPKE MNKYMLTIVQ DILHFEMPAS KMIRRVLKEM 600
  601 IVHNYDRFSK SGSSSAYTGY VERSPHAAST YSLDILYSGS GILRRSNLNI FQYIGKAELH 660
  661 GSQVVIEAQG LEGLIAATPD EGEENLDSYA GMSAILFDVQ LRPVTFFNGY SDLMSKMLSA 720
  721 SGDPVSVVKG LILLIDHSQD IQLQSGLKAN MDIQGGLAID ISGSMEFSLW YRESKTRVKN 780
  781 RVAVVITSDI TVDSSFVKAG LESRAETEAG LEFISTVQFS QYPFLVCMQM DKAEAPLRQF 840
  841 ETKYERLSTG RGYVSRRRKE SLVPGCELPL HQENSEMCNV VFPPQPESGN SGGGWF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle