YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134025066
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSDTQRQITP DIQLSSSCSS AMRAVCVCVL LVCVLVCVLD ASPVPAPEPI RCAPCSADQL  60
   61 SACPAVSPGC AEVVRDPGCG CCSSCALRSG DSCGVHTANC GAGLRCVPRA GDPRPLHSLT 120
  121 RGHAVCVEHH PTEEDTELTS EPGSLHHLLS LNRALDPRDT AEAQESIKSQ LNAIRQKLIQ 180
  181 QGPCHTELLA SLDVITESQQ ALGEKFTSFY LPNCDKHGFY KAKQCVSSLV AQAPRCWCVS 240
  241 SWNGKRLAGT ADVEADTPCP QELTH

Type	Start	End	Confidence
Cytoplasmic	1	20	0.77
Transmembrane Helix	21	41	0.79
Non-Cytoplasmic	42	265	0.96