YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADA2A_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLQPDAGN SSWNGTEAPG GGTRATPYSL QVTLTLVCLA GLLMLFTVFG NVLVIIAVFT  60
   61 SRALKAPQNL FLVSLASADI LVATLVIPFS LANEVMGYWY FGKVWCEIYL ALDVLFCTSS 120
  121 IVHLCAISLD RYWSITQAIE YNLKRTPRRI KAIIVTVWVI SAVISFPPLI SIEKKGAGGG 180
  181 QQPAEPSCKI NDQKWYVISS SIGSFFAPCL IMILVYVRIY QIAKRRTRVP PSRRGPDACS 240
  241 APPGGADRRP NGLGPERGAG TAGAEAEPLP TQLNGAPGEP APTRPRDGDA LDLEESSSSE 300
  301 HAERPQGPGK PERGPRAKGK TKASQVKPGD SLPRRGPGAA GPGASGSGQG EERAGGAKAS 360
  361 RWRGRQNREK RFTFVLAVVI GVFVVCWFPF FFTYTLIAVG CPVPYQLFNF FFWFGYCNSS 420
  421 LNPVIYTIFN HDFRRAFKKI LCRGDRKRIV

Type	Start	End	Confidence
Non-Cytoplasmic	1	35	0.91
Transmembrane Helix	36	59	0.90
Cytoplasmic	60	69	0.86
Transmembrane Helix	70	92	0.91
Non-Cytoplasmic	93	108	0.90
Transmembrane Helix	109	129	0.93
Cytoplasmic	130	149	0.91
Transmembrane Helix	150	172	0.89
Non-Cytoplasmic	173	199	0.92
Transmembrane Helix	200	220	0.91
Cytoplasmic	221	371	0.99
Transmembrane Helix	372	392	0.96
Non-Cytoplasmic	393	409	0.83
Transmembrane Helix	410	430	0.93
Cytoplasmic	431	450	0.95