YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DRD4_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSSATGDG GLLAGRGPES LGTGTGLGGA GAAALVGGVL LIGMVLAGNS LVCVSVASER  60
   61 ILQTPTNYFI VSLAAADLLL AVLVLPLFVY SEVQGGVWLL SPRLCDTLMA MDVMLCTASI 120
  121 FNLCAISVDR FVAVTVPLRY NQQGQCQLLL IAATWLLSAA VAAPVVCGLN DVPGRDPTVC 180
  181 CLEDRDYVVY SSICSFFLPC PLMLLLYWAT FRGLRRWEAA RHTKLHSRAP RRPSGPGPPV 240
  241 SDPTQGPLFS DCPPPSPSLR TSPTVSSRPE SDLSQSPCSP GCLLPDAALA QPPAPSSRRK 300
  301 RGAKITGRER KAMRVLPVVV GAFLMCWTPF FVVHITRALC PACFVSPRLV SAVTWLGYVN 360
  361 SALNPIIYTI FNAEFRSVFR KTLRLRC

Type	Start	End	Confidence
Non-Cytoplasmic	1	29	0.88
Transmembrane Helix	30	53	0.87
Cytoplasmic	54	67	0.83
Transmembrane Helix	68	90	0.93
Non-Cytoplasmic	91	107	0.93
Transmembrane Helix	108	128	0.88
Cytoplasmic	129	145	0.82
Transmembrane Helix	146	167	0.91
Non-Cytoplasmic	168	187	0.92
Transmembrane Helix	188	211	0.89
Cytoplasmic	212	314	0.98
Transmembrane Helix	315	335	0.92
Non-Cytoplasmic	336	351	0.84
Transmembrane Helix	352	372	0.86
Cytoplasmic	373	387	0.88