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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LIPC_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNHLQISVS LVLCIFIQSS ACGQGVGTEP FGRNLGATEE RKPLQKPEIR FLLFKDESDR  60
   61 LGCQLRPQHP ETLQECGFNS SHPLVMIIHG WSVDGLLETW IWKIVGALKS RQSQPVNVGL 120
  121 VDWISLAYQH YAIAVRNTRV VGQEVAALLL WLEESMKFSR SKVHLIGYSL GAHVSGFAGS 180
  181 SMGGKRKIGR ITGLDPAGPM FEGTSPNERL SPDDANFVDA IHTFTREHMG LSVGIKQPIA 240
  241 HYDFYPNGGS FQPGCHFLEL YKHIAEHGLN AITQTINCAH ERSVHLFIDS LQHSNLQNTG 300
  301 FQCSNMDSFS QGLCLNCKKG RCNSLGYDIR RIGHVKSKTL FLITRAQSPF KVYHYQFKIQ 360
  361 FINQMEKPME PTFTMTLLGT KEEIKKIPIT LGEGITSNKT YSLLITLNKD IGELIMLKFK 420
  421 WENSAVWANV WNTVQTIMLW DTEPHYAGLI VKTIWVKAGE TQQRMTFCPD NVDDLQLHPT 480
  481 QEKVFVKCDL KSKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle