YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TRY3_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALIFLAFL GAAVALPLDD DDDKIVGGYT CQKNSLPYQV SLNAGYHFCG GSLINSQWVV  60
   61 SAAHCYKSRI QVRLGEHNID VVEGGEQFID AAKIIRHPSY NANTFDNDIM LIKLNSPATL 120
  121 NSRVSTVSLP RSCGSSGTKC LVSGWGNTLS SGTNYPSLLQ CLDAPVLSDS SCKSSYPGKI 180
  181 TSNMFCLGFL EGGKDSCQGD SGGPVVCNGQ LQGVVSWGYG CAQKGKPGVY TKVCNYVNWI 240
  241 QQTVAAN

Type	Start	End	Confidence
Signal Peptide	1	15	0.99
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	247	0.99