YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE40464
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNTSTMAP MGKTTKMWQW YHVELNDVIL FENWKVQDMT TMIWSCFVVG FAGFLLEFLK  60
   61 YSKWAASMQM RPAGDVDRRT KYGGCVVPSE NRKKLFWARH VVQAMYHFWQ TLLAFILMNI 120
  121 YMTFNVYICL SLCLGLTIGY FFFGSRL

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.73
Transmembrane Helix	40	61	0.91
Cytoplasmic	62	99	0.74
Transmembrane Helix	100	118	0.63
Non-Cytoplasmic	119	122	0.53
Transmembrane Helix	123	144	0.90
Cytoplasmic	145	147	0.75