YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|133778794, gi...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVESLLHFS SVGTLLGTLL LLLVFYRLSR DSEFQKKRKD PPGPKPIPLL GNLLTLDLSR  60
   61 PFDSLCELSK TYGNVYQVFL GPKKVVVLIG HKTVKEALVN FADEFGERDI TPIFRILAND 120
  121 HGILFSNGES WKEMRRFAIS NLRDFGMGKR GSEEKIIEEI HHLKGEFDKF EGKPFDTTQP 180
  181 VNYAVSNIIS SIVYGSRFEY TDPRFTEMVD RANENIRVSG SASMMLYNIF PWLGPFLNSK 240
  241 RTVVRNMLKN RAEFMKLITG LQETLNIHDR RGFVDSFLIR KQSDEQLGKK DTYFHAENLL 300
  301 MTVGNLFAAG TDTTGTTLRW GLMLMAKYPQ IQDRVQEEID RVIGGRQPVV EDRKKLPYTD 360
  361 AVIHEIQRLA NIVPMNLPHV TSCDVTFNGY FIKKGTTVIP LLTSVLKDES EWEKPNSFYP 420
  421 EHFLDEKGQF IKRDAFMPFS AGRRVCLGES LARMELFLFF ASLLQSYRFT TPPGVSEDEL 480
  481 DLKGTVGVTL NPSPHKLCAI KRF

Type	Start	End	Confidence
Cytoplasmic	1	5	0.40
Transmembrane Helix	6	28	0.66
Non-Cytoplasmic	29	503	0.76