YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FPRS4_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVNISMPLN GSEVVFYDST TSSVLWILSL VVLFITFVLG VLGNGLVIWV AGFQMAHTVT  60
   61 TVSYLNLALS DLSFMATLPL HIISMVMRGK WLFGWFLCKL VHIIANINLF VSIFLITLIA 120
  121 MDRCICVLCP VWSQNHRTVS LARKVVLGAW IFALLLTLPH FLFLTTVRDA RGDVYCISKF 180
  181 ESWVATSEEQ LKVSVIAATA SGIINFIIGF SMPMSFIAIC YGLMAAKICR RGFVNSSRPL 240
  241 RVLTAVAVSF FVCWFPFQLI MLLGNIFNNE TLSIIHMLVN PANTLASFNS CLNPILYVFL 300
  301 GQEFRDRLIY SLYASLERAL RED

Type	Start	End	Confidence
Non-Cytoplasmic	1	24	0.73
Transmembrane Helix	25	50	0.87
Cytoplasmic	51	61	0.61
Transmembrane Helix	62	83	0.84
Non-Cytoplasmic	84	99	0.67
Transmembrane Helix	100	125	0.78
Cytoplasmic	126	144	0.76
Transmembrane Helix	145	164	0.92
Non-Cytoplasmic	165	202	0.92
Transmembrane Helix	203	225	0.89
Cytoplasmic	226	241	0.87
Transmembrane Helix	242	262	0.93
Non-Cytoplasmic	263	281	0.79
Transmembrane Helix	282	301	0.73
Cytoplasmic	302	323	0.80