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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IL1AP_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLPWCLMSL FFCGILQSHA SERCDDWGLD TMRQIQVFED EPARIKCPLF EHFLKYNYST  60
   61 AHSSGLTLIW YWTRQDRDLE EPINFRLPEN RISKEKDVLW FRPTLLNDTG NYTCMLRNTT 120
  121 YCSKVAFPLE VVQKDSCFNS PMRLPVHRLY IEQGIHNITC PNVDGYFPSS VKPSVTWYKG 180
  181 CTEIVNFHNV QPKGMNLSFF IPLVSNNGNY TCVVTYLENG RLFHLTRTMT VKVVGSPKDA 240
  241 VPPHIYSPND RVVYEKEPGE ELVIPCKVYF SFIMDSHNEI WWTIDGKKPD DVPVDITIIE 300
  301 SVSYSSTEDE TRTQILSIKK VTPEDLKRNY VCHARNAEGE AEQAAKVKQK VIPPRYTVEL 360
  361 ACGFGATVFL VVVLIVVYHV YWLEMVLFYR AHFGTDETIL DGKEYDIYVS YARNAEEEEF 420
  421 VLLTLRGVLE NEFGYKLCIF DRDSFPGGIV TDETLSFIQK SRRLLVVLSP NYVLQGTQAL 480
  481 LELKAGLENM ASRGNINVIL VQYKAVKDLK VKELKRAKSV LTVIKWKGEK SKYPQGRFWK 540
  541 QLQVAMPVKK SPRWSSSDKQ GLSYSSLKNV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle