YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TRH_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGPWLLLAL ALIFTLTGIP ESCALPEAAQ EEGAVTPDLP GLENVQVRPE RRFLWKDLQR  60
   61 VRGDLGAALD SWITKRQHPG KREEEEKDIE AEERGDLGEG GAWRLHKRQH PGRRANQDKY 120
  121 SWADEEDSDW MPRSWLPDFF LDSWFSDVPQ VKRQHPGRRS FPWMESDVTK RQHPGRRFID 180
  181 PELQRSWEEK EGEGVLMPEK RQHPGKRALG HPCGPQGTCG QTGLLQLLGD LSRGQETLVK 240
  241 QSPQVEPWDK EPLEE

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	255	0.99