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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MEPA_RAT, MEP1A_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWTLPVCLL SLSFSAHIAA VSIQHLSTGH DHDDVDVGEQ QKDISEINSA AGLNLFQGDI  60
   61 LLPRTRNALR DPSSRWKPPI PYILADNLDL NAKGAILNAF EMFRLKSCVD FKPYEGESSY 120
  121 IIFQQFSGCW SMVGDQHVGQ NISIGEGCDY KAIIEHEILH ALGFFHEQSR TDRDDYVNIW 180
  181 WNEIMTDYEH NFNTYDDKTI TDLNTPYDYE SLMHYGPFSF NKNETIPTIT TKIPEFNAII 240
  241 GQRLDFSATD LTRLNRMYNC TRTHTLLDHC AFEKTNICGM IQGTRDDADW VHEDSSQPGQ 300
  301 VDHTLVGRCK AAGYFMYFNT SSGVTGEVAL LESRILYPKR KQQCLQFFYK MTGSPSDRLL 360
  361 IWVRRDDNTG NVRQLAKIQT FQGDSDHNWK IAHVTLNEEK KFRYVFQGTK GDPGNSDGGI 420
  421 YLDDITLTET PCPTGVWTIR NISQVLENTV KGDRLVSPRF YNSEGYGFGV TLYPNGRITS 480
  481 NSGYLGLAFH LYSGDNDVIL EWPVENEQAI MTILDQEPDA RNRMSLSLMF TTSKYQTSSA 540
  541 INGSVIWDRP TKVGVYDKDC DCFRSIDWGW GQAISHQMLM RRNFLKDDTL IIFVDFKDLT 600
  601 HLRQTEVPIS SRSVIPRGLL LQGQEPLALG DSRIAMMEES LPRRLDQRQP SRPKRSVENT 660
  661 GPMEDHNWPQ YFRDPCDPNP CQNEGTCVNV KGMASCRCVS GHAFFYTGER CQAMHVHGSL 720
  721 LGLLIGCITA LIFLTFITFS NTYQKLRQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle