YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169234844, gi...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEAWLWRW GWGWGQRCPG RPGLPGPGPG PTTFLHFLLL LGLVAADITD GNSEHLKREH  60
   61 SLIKPYQGVG SSSMPLWDFQ GSTMLTSQYV RLTPDERSKE GSIWNHQPCF LKDWEMHVHF 120
  121 KVHGTGKKNL HGDGIALWYT RDRLVPGPVF GSKDNFHGLA VFLDTYPNDE TTERVFPYIS 180
  181 VMVNNGSLSY DHSKDGRWSE LAGCTADFRN RDHDTFLAVR YSRGRLTVMT DLEDKNEWKN 240
  241 CIDVTGVRLP TGYYFGASAG TGDLSDNHDL ISIKLFQLTV ERTPEEESID WTKIEPGVNF 300
  301 LKSPKDNVDD PTGNFRGGPL TGWRVFLLLL CALLGIIVCA VVGAVVFQKR QERNKRFY

Type	Start	End	Confidence
Non-Cytoplasmic	1	324	0.76
Transmembrane Helix	325	347	0.96
Cytoplasmic	348	358	0.78