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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: STS_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWPCLLALL LSQLNFLCAA RPGPGPNFLL IMADDLGIGD LGCYGNRTLR TPHIDRLALE  60
   61 GVKLTQHLAA APLCTPSRAA FLTGRYPVRS GMASHGRLGV FLFSASSGGL PPNEVTFAKL 120
  121 LKGQGYTTGL VGKWHLGLSC QAASDFCHHP GRHGFDRFLG TPTTNLRDCK PGGGTVFGSA 180
  181 QQVFVVLPMN ILGAVLLAMA LARWAGLARP PGWVFGVTVA AMAAVGGAYV AFLYHFRPAN 240
  241 CFLMADFTIT QQPTDYKGLT QRLASEAGDF LRRNRDTPFL LFLSFMHVHT AHFANPEFAG 300
  301 QSLHGAYGDA VEEMDWAVGQ VLATLDKLGL ANNTLVYLTS DHGAHVEELG PNGERHGGSN 360
  361 GIYRGGKANT WEGGIRVPGL VRWPGVIVPG QEVEEPTSNM DVFPTVARLA GAELPTDRVI 420
  421 DGRDLMPLLL GHVQHSEHEF LFHYCNAYLS AVAWRPHNSS SVWKAFYFTP NFDPPGSNGC 480
  481 FSTHVCMCHG HHVTHHDPPL LFDIARDPRE RHPLTPETEP RHGEILRNMD AAARAHVATL 540
  541 EEAPNQLSMS NVAWKPWLQL CLPSKPHPLA CRCAGDG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle