YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38454232, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEQEVTYSS VRFSKSSGLQ NQVKPEETKG PKEAGHRECY VPWHLIVIAL GILCTLLLLT  60
   61 VAVLVTIIFQ YSQEKHELQE TLNHHHNCSA MQRDIDLKEE MLRKISIDCS PGNDLLESFN 120
  121 RSKNRWYSKT KAVVNSSQHK GSEIETYWFC YGIKCYYVIK DGKSWDECKQ TCQNSSLFLL 180
  181 KIDDEDERKF LQQQLIPDNY WIGFSYDKEK KEWAWIENGP SKLASNTMKF NKKLGGCVFL 240
  241 SKTRLDHTDC INLYSCICGK KLNKFPDLPL QLVLK

Type	Start	End	Confidence
Cytoplasmic	1	44	0.89
Transmembrane Helix	45	69	0.90
Non-Cytoplasmic	70	275	0.93