YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1354756, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEQRFTFST ARFHKSSVLQ NQERTEETQR PRKAGNRVCW QITVTALGIL CFFRLVSVAV  60
   61 MVINIFQYSQ RKHELQETLS NLHHNYSTMQ NDINLKEEML RDMSTEYSAV NHFLDFLNRE 120
  121 KNRCYNKTKT VLDSSQHSGR GVEMHWFCYG IKCYYFIMDR KTWSGCTQTC QNFSLPLLTI 180
  181 DDEDELMFLH LLVTPDSYWI GLSYDNKKSD WTWIDNNPSK LALNTRKYNI KDGGCVFLSK 240
  241 TRLDNINCDN LFSCICGKRL DKFPD

Type	Start	End	Confidence
Cytoplasmic	1	38	0.93
Transmembrane Helix	39	63	0.86
Non-Cytoplasmic	64	265	0.96